Uses of Class
org.variantsync.diffdetective.datasets.Repository

Packages that use Repository

Package	Description
org.variantsync.diffdetective
org.variantsync.diffdetective.analysis
org.variantsync.diffdetective.analysis.strategies
org.variantsync.diffdetective.datasets
org.variantsync.diffdetective.datasets.predefined
org.variantsync.diffdetective.diff.git
org.variantsync.diffdetective.examplesearch
org.variantsync.diffdetective.experiments.esecfse22
org.variantsync.diffdetective.experiments.views
org.variantsync.diffdetective.mining
org.variantsync.diffdetective.variation.diff
org.variantsync.diffdetective.variation.diff.parse

Uses of Repository in org.variantsync.diffdetective

Fields in org.variantsync.diffdetective with type parameters of type Repository

Modifier and Type	Field	Description
private final Function<Repository,DiffFilter>	AnalysisRunner.Options.getFilterForRepo	The field for the getFilterForRepo record component.
private final Function<Repository,PatchDiffParseOptions>	AnalysisRunner.Options.getParseOptionsForRepo	The field for the getParseOptionsForRepo record component.

Methods in org.variantsync.diffdetective that return types with arguments of type Repository

Modifier and Type	Method	Description
Function<Repository,DiffFilter>	AnalysisRunner.Options.getFilterForRepo()	Returns the value of the getFilterForRepo record component.
Function<Repository,PatchDiffParseOptions>	AnalysisRunner.Options.getParseOptionsForRepo()	Returns the value of the getParseOptionsForRepo record component.

Method parameters in org.variantsync.diffdetective with type arguments of type Repository

Modifier and Type	Method	Description
static void	AnalysisRunner.run(AnalysisRunner.Options options, BiConsumer<Repository,Path> validation)	Main method to start the analysis on a set of git repositories.

Constructor parameters in org.variantsync.diffdetective with type arguments of type Repository

Modifier	Constructor	Description
	Options(Path repositoriesDirectory, Path outputDirectory, Path datasetsFile, Function<Repository,PatchDiffParseOptions> getParseOptionsForRepo, Function<Repository,DiffFilter> getFilterForRepo, boolean preloadReposBeforeAnalysis, boolean pullRepositoriesBeforeAnalysis)	Creates an instance of a Options record class.

Uses of Repository in org.variantsync.diffdetective.analysis

Fields in org.variantsync.diffdetective.analysis declared as Repository

Modifier and Type	Field	Description
protected final Repository	Analysis.repository

Methods in org.variantsync.diffdetective.analysis that return Repository

Modifier and Type	Method	Description
Repository	Analysis.getRepository()	The repository this analysis is run on.

Method parameters in org.variantsync.diffdetective.analysis with type arguments of type Repository

Modifier and Type	Method	Description
static void	Analysis.forEachRepository(List<Repository> repositoriesToAnalyze, Path outputDir, BiConsumer<Repository,Path> analyzeRepository)	Runs analyzeRepository on each repository, skipping repositories where an analysis was already run.
static void	Analysis.forEachRepository(List<Repository> repositoriesToAnalyze, Path outputDir, BiConsumer<Repository,Path> analyzeRepository)	Runs analyzeRepository on each repository, skipping repositories where an analysis was already run.

Constructors in org.variantsync.diffdetective.analysis with parameters of type Repository

Modifier	Constructor	Description
	Analysis(String taskName, List<Analysis.Hooks> hooks, Repository repository, Path outputDir)	Constructs the state used during an analysis.

Uses of Repository in org.variantsync.diffdetective.analysis.strategies

Fields in org.variantsync.diffdetective.analysis.strategies declared as Repository

Modifier and Type	Field	Description
protected Repository	AnalysisStrategy.repo

Methods in org.variantsync.diffdetective.analysis.strategies with parameters of type Repository

Modifier and Type	Method	Description
void	AnalysisMonitor.start(Repository repo, Path outputPath)
void	AnalysisStrategy.start(Repository repo, Path outputPath)	Invoked when the analysis starts.
void	AnalyzeAllAndExport.start(Repository repo, Path outputPath)
void	AnalyzeAndExportIncrementally.start(Repository repo, Path outputPath)
void	CompositeAnalysisStrategy.start(Repository repo, Path outputPath)

Uses of Repository in org.variantsync.diffdetective.datasets

Methods in org.variantsync.diffdetective.datasets that return Repository

Modifier and Type	Method	Description
Repository	DatasetFactory.create(DatasetDescription dataset)	Loads the repository of the given dataset description.
static Repository	Repository.fromDirectory(Path dirPath, String repoName)	Creates a repository from an existing directory.
static Repository	Repository.fromRemote(Path localPath, URI repoUri, String repoName)	Creates a repository from a remote repository.
static Repository	Repository.fromZip(Path filePath, String repoName)	Creates a repository from a local zip file.
Repository	Repository.setDiffFilter(DiffFilter filter)	Set the diff filter for reading this repository.
Repository	Repository.setParseOptions(PatchDiffParseOptions parseOptions)	Set options for parsing parts of this repository's evolution history.

Methods in org.variantsync.diffdetective.datasets that return types with arguments of type Repository

Modifier and Type	Method	Description
List<Repository>	DatasetFactory.createAll(Collection<DatasetDescription> datasets, boolean preload, boolean pull)	Runs DatasetFactory.create(org.variantsync.diffdetective.datasets.DatasetDescription) for all given dataset description.
static Optional<Repository>	Repository.tryFromRemote(Path localDir, String repoUri, String repoName)	Creates a repository from a remote repository.

Methods in org.variantsync.diffdetective.datasets with parameters of type Repository

Modifier and Type	Method	Description
Iterator<org.eclipse.jgit.revwalk.RevCommit>	CommitLister.listCommits(Repository repository)

Uses of Repository in org.variantsync.diffdetective.datasets.predefined

Methods in org.variantsync.diffdetective.datasets.predefined that return Repository

Modifier and Type	Method	Description
static Repository	Marlin.cloneFromGithubTo(Path localDir)	Clones Marlin from Github.
static Repository	StanciulescuMarlin.fromZipInDiffDetectiveAt(Path pathToDiffDetective)	Instance for the default predefined Marlin repository.

Uses of Repository in org.variantsync.diffdetective.diff.git

Methods in org.variantsync.diffdetective.diff.git with parameters of type Repository

Modifier and Type	Method	Description
static CommitDiffResult	GitDiffer.createCommitDiff(Repository repository, org.eclipse.jgit.revwalk.RevCommit parentCommit, org.eclipse.jgit.revwalk.RevCommit childCommit)	Creates a CommitDiff that describes all changes made by the given childCommit to the given parentCommit.
static CommitDiffResult	GitDiffer.createCommitDiffFromFirstParent(Repository repository, String commitHash)
static CommitDiffResult	GitDiffer.createCommitDiffFromFirstParent(Repository repository, org.eclipse.jgit.revwalk.RevCommit currentCommit)	Creates a CommitDiff from a given commit.
static CommitDiffResult	GitDiffer.createWorkingTreeDiff(Repository repository, org.eclipse.jgit.revwalk.RevCommit commit)	The same as GitDiffer.createCommitDiff(Repository, RevCommit, RevCommit) but diffs the given commit against the current working tree.
static BufferedReader	GitDiffer.getBeforeFullFile(Repository repository, org.eclipse.jgit.revwalk.RevCommit commit, String filename)	Gets the full content of a file before a commit.
private static CommitDiffResult	GitDiffer.getPatchDiffs(Repository repository, org.eclipse.jgit.treewalk.AbstractTreeIterator prevTreeParser, org.eclipse.jgit.treewalk.AbstractTreeIterator currentTreeParser, org.eclipse.jgit.revwalk.RevCommit parentCommit, org.eclipse.jgit.revwalk.RevCommit childCommit)	Obtains the CommitDiff between two commit's trees.

Uses of Repository in org.variantsync.diffdetective.examplesearch

Methods in org.variantsync.diffdetective.examplesearch with parameters of type Repository

Modifier and Type	Method	Description
static Analysis	Main.findExamplesIn(Repository repo, Path repoOutputDir)

Uses of Repository in org.variantsync.diffdetective.experiments.esecfse22

Fields in org.variantsync.diffdetective.experiments.esecfse22 with type parameters of type Repository

Modifier and Type	Field	Description
static final BiFunction<Repository,Path,Analysis>	EditClassValidation.AnalysisFactory

Methods in org.variantsync.diffdetective.experiments.esecfse22 with parameters of type Repository

Modifier and Type	Method	Description
static LineGraphExportOptions<DiffLinesLabel>	EditClassValidation.ValidationExportOptions(Repository repository)	Creates new export options for running the validation on the given repository.

Uses of Repository in org.variantsync.diffdetective.experiments.views

Methods in org.variantsync.diffdetective.experiments.views with parameters of type Repository

Modifier and Type	Method	Description
private static Analysis	Main.AnalysisFactory(Repository repo, Path repoOutputDir)	Creates the analysis to perform on the given repository to run our feasibility study.

Uses of Repository in org.variantsync.diffdetective.mining

Fields in org.variantsync.diffdetective.mining with type parameters of type Repository

Modifier and Type	Field	Description
static BiFunction<Repository,Path,Analysis>	VariationDiffMiner.AnalysisFactory

Methods in org.variantsync.diffdetective.mining with parameters of type Repository

Modifier and Type	Method	Description
static LineGraphExportOptions<DiffLinesLabel>	VariationDiffMiner.MiningExportOptions(Repository repository)
static List<VariationDiffTransformer<DiffLinesLabel>>	VariationDiffMiner.Postprocessing(Repository repository)

Uses of Repository in org.variantsync.diffdetective.variation.diff

Methods in org.variantsync.diffdetective.variation.diff with parameters of type Repository

Modifier and Type	Method	Description
static org.variantsync.functjonal.Result<VariationDiff<DiffLinesLabel>,List<DiffError>>	VariationDiff.fromPatch(PatchReference patchReference, Repository repository)	Parses a patch of a Git repository.

Uses of Repository in org.variantsync.diffdetective.variation.diff.parse

Methods in org.variantsync.diffdetective.variation.diff.parse with parameters of type Repository

Modifier and Type	Method	Description
static CommitDiff	VariationDiffParser.parseCommit(Repository repo, String commitHash)	Parses the given commit of the given repository.
static PatchDiff	VariationDiffParser.parsePatch(Repository repo, String file, String commitHash)	Parses the given patch of the given repository.